PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_65480.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family NAC
Protein Properties Length: 55aa    MW: 6034.83 Da    PI: 9.5779
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_65480.2genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM39.81.4e-12127102128
           NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
                   ++ktLvfykgrap+g+k+dW+mheyrl
  MLOC_65480.2   1 MRKTLVFYKGRAPHGHKSDWIMHEYRL 27 
                   89************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF023652.9E-5127IPR003441NAC domain
PROSITE profilePS5100515.671155IPR003441NAC domain
SuperFamilySSF1019411.44E-11131IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 55 aa     Download sequence    Send to blast
MRKTLVFYKG RAPHGHKSDW IMHEYRLDDA VAIPSNPANP GAGAYYSGAS SPVFV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2491201e-81AK249120.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf17a09, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012474773.14e-16PREDICTED: NAC domain-containing protein 43-like
SwissprotQ9M2741e-16NAC66_ARATH; NAC domain-containing protein 66
TrEMBLM0Y3X51e-34M0Y3X5_HORVD; Uncharacterized protein
STRINGMLOC_65480.15e-31(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61910.17e-18NAC domain protein 66